Insertion junction: CLIP2.060487_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060487
Chromosome:chromosome 8
Location:1639244
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g365825 (1 of 1) 1.14.99.42 - Zeaxanthin 7,8-dioxygenase / Zeaxanthin 7,8(7',8')-cleavage dioxygenase 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGCCCCTGCCTTTCCCCGTGCTGCGTTCGACAGGGGCCGGAAGCGCC
Internal bar code:CTCTTTAAGGTAAGGTATAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1206
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGGATGATGAGGAGGAG
Suggested primer 2:TGCATTGTGTCCAGTTTGCG