Insertion junction: CLIP2.060493_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060493
Chromosome:chromosome 6
Location:1796010
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g263300 (1 of 2) PF05648 - Peroxisomal biogenesis factor 11 (PEX11) (PEX11) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCTGTAACACTCAGGTGGCGTTCTTGTTTCATGTGTGTTTGCGTGTG
Internal bar code:TATTTTTTATCGTTGAGCACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4218
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTATCGCATGAGAGCTGT
Suggested primer 2:GGTGGAGGAGGTGAAGAAGC