Insertion junction: CLIP2.060493_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060493
Chromosome:chromosome 6
Location:1796024
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g263300 (1 of 2) PF05648 - Peroxisomal biogenesis factor 11 (PEX11) (PEX11) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGCAGCCCAGCCCAGGCCCCTCCGCCACATCATCCACAATCCTGCCT
Internal bar code:ACATATATCGTGTTTCTTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:634
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGAGGAGGTGAAGAAGC
Suggested primer 2:CGGTATCGCATGAGAGCTGT