Insertion junction: CLIP2.060500_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060500
Chromosome:chromosome 12
Location:6474234
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g537611 Class II-Zygote-specific protein with GPI-anchor signal 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCTCGAAAGCGGGGGGTGTCCAGTTCTTTGAAGCGCGTAGATATCGT
Internal bar code:GCGTGGTAACGGTGTGATGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1821
LEAP-Seq percent confirming:89.0909
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCCATGTGTGGGATCAGG
Suggested primer 2:AGTCAAGCTGCTGGTGAGAC