Insertion junction: CLIP2.060501_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060501
Chromosome:chromosome 3
Location:8176574
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200500 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGCTAGTGCTCCTCCTTAGGCAAGCGCTCCACGACCGCCTTCAGCCG
Internal bar code:TATTCCATTAGAAAGTTCCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2680
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTACTGCACCACATCCTG
Suggested primer 2:TATCCCGCATGTATGTGCCC