Insertion junction: CLIP2.060502_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.060502
Chromosome:chromosome 9
Location:6336905
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414250 ALG8,GTR20 (1 of 1) 2.4.1.265 - Dolichyl-P-Glc:Glc(1)Man(9)GlcNAc(2)-PP-dolichol alpha-1,3- glucosyltransferase / Dol-P-Glc:Glc(1)Man(9)GlcNAc(2)-PP-Dol alpha-1->3-glucosyltransferase; Alpha-1%252C3-glucosyltransferase 8 outside_mRNA
Cre09.g414300 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAATGAAGTATTACGCACGTCTTGCTCCAGTTGTCATACACCTTCTTGA
Internal bar code:TGATGCGACTATAACGAGACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1136
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCACCCCCATTGAGTTC
Suggested primer 2:CTGACCTCGGTGTACTGCAG