Insertion junction: CLIP2.060508_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060508
Chromosome:chromosome 6
Location:415908
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g251716 (1 of 17) IPR001305 - Heat shock protein DnaJ, cysteine-rich domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGGTGCTGTATGCCTTCGCCAACGGCGTGCAGTGAGCGGAGACTGTG
Internal bar code:GACAACGAGTTACCCTAGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1735
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGATGCAACATCCCTGAT
Suggested primer 2:TAGTGATGCAAAACGGCCCT