Insertion junction: CLIP2.060510_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060510
Chromosome:chromosome 3
Location:3918822
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171000 (1 of 1) IPR003072//IPR006569//IPR008942 - Orphan nuclear receptor, NOR1 type // CID domain // ENTH/VHS 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGCACATGTGTGCGGCAGCGCCTGCACGGCCGAGTGCTGAGGCCCAT
Internal bar code:CAGACCGTCAGAGCATAGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4503
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCAGTGGTGTGTTGGCT
Suggested primer 2:TGTGGAAGTGAAGACCTCGC