Insertion junction: CLIP2.060513_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060513
Chromosome:chromosome 13
Location:285906
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g563900 UBL1 Ubiquitin-like protein; (1 of 1) PTHR10666//PTHR10666:SF160 - UBIQUITIN // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGACATCCCGGCCGGAGTAGCGCAGCAGCAGGGCGCTGGTGAGCGAGCT
Internal bar code:CGTGAGTATCCGAAGATTTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2566
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTGAAGCAACACCTCCA
Suggested primer 2:GGCTGTTGACAACTGTGCTG