Insertion junction: CLIP2.060518_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060518
Chromosome:chromosome 4
Location:3138499
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225950 (1 of 11) PF00439 - Bromodomain (Bromodomain) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGACACACATGATCCCGCCGCGCGACGAGGCGTATGCCGGGTCAGCCC
Internal bar code:CTTCGTTTATTACTGTGTACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1984
LEAP-Seq percent confirming:64.8148
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCAGTAACGCATTGCCG
Suggested primer 2:GATGGTGTCGCAGTAGGGAG