Insertion junction: CLIP2.060523_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060523
Chromosome:chromosome 17
Location:1052432
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g703550 (1 of 5) IPR001025 - Bromo adjacent homology (BAH) domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACGTGACACACGTACGGGCGCGACACAGCGACACAGCGCTGTTTCAGC
Internal bar code:AAACTCTTGGGCGAGTGCTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5353
LEAP-Seq percent confirming:92.5
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGTCTTTTGAGACGGGA
Suggested primer 2:GACCTGCAGCTTGAACTCCT