Insertion junction: CLIP2.060529_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060529
Chromosome:chromosome 16
Location:1553435
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653450 BAR1 Bin/Amphiphysin/Rvs domain protein 1; (1 of 1) PF03114 - BAR domain (BAR) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAGGTGGTGGAAGGAGAGGGGGTGAGGTAGCGCGCGCGTAGGCTACC
Internal bar code:CAAGCGGTTTCGATTTCGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2702
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGTGTTCCCAAGACGGA
Suggested primer 2:TCCCGCATGTTTACCGTTCA