Insertion junction: CLIP2.060534_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060534
Chromosome:chromosome 10
Location:3733586
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g801158 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTCGCGCTCACCAGGACTGAGCATGTGAATCCCGAAAGCTTCCCGAAT
Internal bar code:TATGGGCATTGGGTATCTGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:270
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CATACTTGCTCGCAATGGGC
Suggested primer 2:CATGTCTCTACATCGGGCCC