Insertion junction: CLIP2.060538_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060538
Chromosome:chromosome 6
Location:6348155
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293100 (1 of 2) PTHR19957:SF124 - SYNTAXIN-8B-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGATTGGGGTTCAGCAAAAGATCCAACCCTCTGCTTATACAAGCCACCG
Internal bar code:TTTCATCCCGGATGTTGCCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4005
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:TACGGCTCTGGGGAGATGAA
Suggested primer 2:GGACATCGACGAGCAGGTAG