Insertion junction: CLIP2.060538_5

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060538
Chromosome:chromosome 16
Location:2424604
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659900 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCGAAATTTGATGTGCGGGGCAGATAAGGAACCAAAACGAGTAAACG
Internal bar code:GGATTTAGCGTATAAGAATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1381
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTGGTGAATGACTGGACG
Suggested primer 2:AATGTACTGCTGCCGTGACA