Insertion junction: CLIP2.060545_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060545
Chromosome:chromosome 12
Location:1455577
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g488250 (1 of 2) K17822 - DCN1-like protein 1/2 (DCUN1D1_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCCGGTAGCCCCGCTCCCATCTTCCAACACCACCGCCACCGCCACCTT
Internal bar code:ATTGGGGCTGTAGTTTAGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1038
LEAP-Seq percent confirming:64.5161
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ACCATCACCATCACCAGCAG
Suggested primer 2:CTGGTGCTTGACGTGAGACT