Insertion junction: CLIP2.060546_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060546
Chromosome:chromosome 16
Location:2698928
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661750 (1 of 2) PF08332 - Calcium/calmodulin dependent protein kinase II association domain (CaMKII_AD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGAAGAATGAGCTCTGACAGGAAAGTAGTGGAAGGAGTTGTTTCCGAG
Internal bar code:GTTTGATGGTTCGCCAACTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2742
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGGCTCTAGGATGCAGAC
Suggested primer 2:CCGCCGAGATTGAGGACTAC