Insertion junction: CLIP2.060546_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060546
Chromosome:chromosome 16
Location:2698936
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661750 (1 of 2) PF08332 - Calcium/calmodulin dependent protein kinase II association domain (CaMKII_AD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTCGAAAATCGTTATTGGCACGCATGCAGGACCTATGATACCACAGCC
Internal bar code:GTTTGATGGTTCGCCAACTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:654
LEAP-Seq percent confirming:16.129
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCCGAGATTGAGGACTAC
Suggested primer 2:GTCGGCTCTAGGATGCAGAC