Insertion junction: CLIP2.060550_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060550
Chromosome:chromosome 17
Location:6867577
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g747447 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCATATGGGTGATAAAGCTCACAAGATGTATTACTGAAGTGGTTTTG
Internal bar code:TCATAGAGTGTCAATGGACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:781
LEAP-Seq percent confirming:23.0769
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCGAACCGTCCTCAGTT
Suggested primer 2:GGTACGATATACACGCCGCA