Insertion junction: CLIP2.060555_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060555
Chromosome:chromosome 6
Location:3918370
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278193 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACACACCCATTAATGCAGCCACGTCAAGCTTCCGCAGCAGTAGACAAG
Internal bar code:CTTCAGGGGGCGACTTTTATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:7077
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTCAAATGCGATCGGAC
Suggested primer 2:CATTCACAGCGCAATAGCCC