Insertion junction: CLIP2.060567_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060567
Chromosome:chromosome 12
Location:6132597
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g535300 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCATACCCTTGGATGCCAGTTTGACATTATGCTGGATTATGACCAGCTT
Internal bar code:GGACCACAGATAGATCAGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1340
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAGACCGGTAGGGAGGAA
Suggested primer 2:GCCCTGTTGTTGAAAGCCAG