Insertion junction: CLIP2.060576_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060576
Chromosome:chromosome 7
Location:1181226
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g321200 (1 of 5) PTHR13271//PTHR13271:SF28 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCTGCATCACGCGCAGGCTCCCCGCTGGCTGCGGTGGCGCAGCACAG
Internal bar code:GATGGTAGTGTATTGGCTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:60
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCTTGATCTCCAGCAGC
Suggested primer 2:CGAGCGAACAGGCGTTATTG