Insertion junction: CLIP2.060577_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060577
Chromosome:chromosome 12
Location:3419212
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g497750 TSPP1,TPS2 Trehalose 6-phosphate phosphatase; (1 of 1) K01087 - trehalose 6-phosphate phosphatase (otsB) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACGCGCCCCGTGCAGGCCTCTGCGCCTCAAAGCCTTGAACACAGGCG
Internal bar code:TGGAGAGGTTTTTTCCCTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:415
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGCATTTTGGTGAGCACG
Suggested primer 2:CCCCATCCACCGTATCGATG