Insertion junction: CLIP2.060581_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060581
Chromosome:chromosome 17
Location:3898283
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727750 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATTAGATGTAGAGGTACTGAATTAGTAGGGCCGTGTTACAGGAGCAAC
Internal bar code:ATTGGATTGGTATCACCGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1806
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCACACAGCAGTCACAT
Suggested primer 2:CACCCCCAAGCAGCAGATAA