Insertion junction: CLIP2.060584_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060584
Chromosome:chromosome 17
Location:823101
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g701809 (1 of 52) 2.7.11.22 - Cyclin-dependent kinase / Cdk-activating protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCAGACCTGTTCTGCCCCTGCAAAACAAGTCTAGCCGCGAACACAAGA
Internal bar code:AGGGGTGGCCTCATGAAGATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1477
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AGTACGTGTGCTTTACGGCA
Suggested primer 2:CATATTGCCAGTCTGCGTGC