Insertion junction: CLIP2.060590_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060590
Chromosome:chromosome 4
Location:1856157
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218050 RWP8 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAAGTGTGCATTGGGGGGGCTCAGCCTGTAACAAAAATGCATGAGGC
Internal bar code:AAGGGCGTATAAGTAGGAGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1829
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGCAAGTGGCTAAGGGT
Suggested primer 2:CAAAGGCATCGCACTCATCG