Insertion junction: CLIP2.060596_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060596
Chromosome:chromosome 1
Location:6480956
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g045800 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGAGGAGCTAGTACGGCAACAAGTAGAATGTGTGGCCGACAGCTGAGT
Internal bar code:GAGACTTCTGTAGTGACAAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1328
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GACCGGTAGTATGGCTGCTC
Suggested primer 2:GTGGCCAAGGAGATGGTGAA