Insertion junction: CLIP2.060599_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060599
Chromosome:chromosome 2
Location:3531393
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099150 SNAPA1,FAP375 Alpha-SNAP, SNARE complex protein; (1 of 1) K15296 - alpha-soluble NSF attachment protein (NAPA, SNAPA, SEC17) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGCAAAGGACTCCGGATATCGGTTTGGGGCCCCTGGTTCATACCCCA
Internal bar code:AATTCGGTTTCATTTAAACTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2925
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCTTGTTGCCGAAGAAA
Suggested primer 2:CACCGCTGATGCCTTCCTTA