Insertion junction: CLIP2.060604_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060604
Chromosome:chromosome 9
Location:515209
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre18.g748797 (1 of 1) PTHR32026:SF10 - PROTEIN Y39F10A.3-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCCACGAAACCTCCCGGACCCCCCGACCGACCGACCGACCGACCCCC
Internal bar code:GGACTGACTGCCAAGCCTCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2057
LEAP-Seq percent confirming:80.7692
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCGTATCGCAGTGCAGAT
Suggested primer 2:CGCTGCAGGGTTTTGAGTTC