Insertion junction: CLIP2.060616_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060616
Chromosome:chromosome 12
Location:2297446
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508250 (1 of 1) PTHR22975:SF9 - F6D8.33-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTAACAAACACACGCCACCCCAGGCGTGGTAAACCTACACAGTACAAT
Internal bar code:ATTAAGCAACAGGCGTTGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1341
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTATCAGCAAGTGTCGCG
Suggested primer 2:AAGCACGTCTGCAGCTTAGT