Insertion junction: CLIP2.060617_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060617
Chromosome:chromosome 16
Location:886380
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648100 (1 of 1) K05757 - actin related protein 2/3 complex, subunit 1A/1B (ARPC1A_B) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCTTTGTTCACGCACCACGACATGCAGGATTGAATGGCATCTTTTCC
Internal bar code:CCTTGTCGCTACATCTGCTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1202
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAGCGCTGACCATACCTC
Suggested primer 2:GTGCGGTATTGCGATCACAC