Insertion junction: CLIP2.060618_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060618
Chromosome:chromosome 3
Location:5769963
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g187500 (1 of 1) PTHR23339:SF64 - CYCLIN-DEPENDENT KINASE INHIBITOR 3; Dual specificity phosphatase outside_mRNA
Cre03.g187550 (1 of 1) PF04858 - TH1 protein (TH1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTACCATCTTCTCTTCCACCAACGGGCCGACGATACTCCACTTTCCAC
Internal bar code:GATTGACAGACATATCGGGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2296
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACGACTGTGTGTGGCAG
Suggested primer 2:AAGAAGCTTTGCCGCACAAG