Insertion junction: CLIP2.060621_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060621
Chromosome:chromosome 6
Location:3129745
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275550 RWP2 (1 of 1) IPR003035//IPR003072 - RWP-RK domain // Orphan nuclear receptor, NOR1 type; RWP-RK transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCGTCCCGCCACACGCGCGACGCAAAAAAATTCCCAACACGACATCT
Internal bar code:CTGCAATATGTGATTGTTAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2040
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCGGCACATTTCTGGTG
Suggested primer 2:ACGTACCCCTATCCACTGCT