Insertion junction: CLIP2.060621_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060621
Chromosome:chromosome 6
Location:3129746
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275550 RWP2 (1 of 1) IPR003035//IPR003072 - RWP-RK domain // Orphan nuclear receptor, NOR1 type; RWP-RK transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTGTATTGCTTCGGAAGTAGGTCACCGTGAAGTAGCAACAGCGTAAA
Internal bar code:CTGCAATATGTGATTGTTAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2267
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTACCCCTATCCACTGCT
Suggested primer 2:TTTGCGGCACATTTCTGGTG