Insertion junction: CLIP2.060625_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060625
Chromosome:chromosome 11
Location:3568958
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477950 (1 of 1) IPR000104//IPR005502 - Antifreeze protein, type I // ADP-ribosylation/Crystallin J1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAGCCCGCAGCGCGGGGAGATTCGTGAGAGGCTAGACCGCGGACTGG
Internal bar code:CCCGAAGCCGGATTCGTCTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1386
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGCATACTGGCGTGATG
Suggested primer 2:TCTGATGGGGTCGCTCAATG