Insertion junction: CLIP2.060631_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060631
Chromosome:chromosome 11
Location:2833881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTTTGCCCCACTCCAGACCGGCGTCATACCCGTGTGCGCCATACCCGT
Internal bar code:ACGAGGGTAAGCGAGCGATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3940
LEAP-Seq percent confirming:70.6897
LEAP-Seq n confirming:123
LEAP-Seq n nonconfirming:51
LEAP-Seq n unique pos:174

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGCAGGTAGTCCAGGTCT
Suggested primer 2:ACAACCACCTACTTCCTGCG