Insertion junction: CLIP2.060632_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060632
Chromosome:chromosome 3
Location:8110001
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201000 (1 of 1) PTHR33477:SF2 - P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCAAATATAAAGGTGATGTACATGCAACCACTTGCTGTGCGACCGGCA
Internal bar code:CGATAAGCGGCATGGACACGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5779
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAAAACGAAGGCGCTGTG
Suggested primer 2:GAATGCATCCTTCCCCACCA