Insertion junction: CLIP2.060635_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060635
Chromosome:chromosome 1
Location:5475720
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038700 CLV5 Voltage-gated chloride channel; (1 of 2) K05016 - chloride channel 7 (CLCN7) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGATGGGCAGCCACGCAGTCCGCCCACGAGCTTTTTGTGATGGCCGCCG
Internal bar code:GACTATGCGGAACATGGGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5080
LEAP-Seq percent confirming:98.7654
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCCCTAACACACCATGG
Suggested primer 2:ACGGGGTACTGTACATCGGA