Insertion junction: CLIP2.060638_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060638
Chromosome:chromosome 17
Location:3689868
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802073 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAGCTTCCGCCACCGCGTGTTGCCGGCAGCCTGGGGACAGGCACGAT
Internal bar code:ATGATGATTCCATATTTGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2087
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGGCTGGTGTTGTCAAG
Suggested primer 2:AATTGCCCTTCAGACTCCCG