Insertion junction: CLIP2.060641_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060641
Chromosome:chromosome 17
Location:3339547
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722750 CTAP4 Chloroplast translocon associated protein 4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCACTGCGTGCTCCATTGCCAGCCCGCGTGTCCCTGCCTGTGAGACCCC
Internal bar code:CCATACCTTTCTTGCACTACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1897
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGGGTTGTATCAACAGCA
Suggested primer 2:TGCCGTGTTTGTATCGCTCT