Insertion junction: CLIP2.060645_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060645
Chromosome:chromosome 1
Location:7857802
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g055416 (1 of 1) K12859 - U5 snRNP protein, DIM1 family (TXNL4A, DIB1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAATTGCAATACCTTACCGGGTTACAAGCCGGCCTGCACTTTGGACAAA
Internal bar code:TGCAAGGACTCTATATGCCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:878
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGTCGTTTGGGCACAAG
Suggested primer 2:TAGCGATCGTCGACGTCAAG