Insertion junction: CLIP2.060665_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060665
Chromosome:chromosome 1
Location:5108802
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035650 3'UTR
Cre01.g035700 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAATGCCGAACATTCGCAGTGCCGTACAATTCCATGCAAATTTGGGCAT
Internal bar code:TCAACGAGGTACACTTACTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4606
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTAGGAATACTGGGCGG
Suggested primer 2:GGCGCAGTTCTTGAGTTTGG