Insertion junction: CLIP2.060665_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060665
Chromosome:chromosome 1
Location:5108823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035650 3'UTR
Cre01.g035700 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAATAAAGCTGCGTATGCAGTAGTGTGCGTGAGCATGGGGGTAACGCGT
Internal bar code:AGACATGGTCCGTCGGGAATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4547
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGCAGTTCTTGAGTTTGG
Suggested primer 2:GTCGTAGGAATACTGGGCGG