Insertion junction: CLIP2.060670_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060670
Chromosome:chromosome 1
Location:5515234
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g039250 RPS2 Cytosolic 80S ribosomal protein S2; (1 of 1) K02981 - small subunit ribosomal protein S2e (RP-S2e, RPS2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCGCACGGATTTTCCCTCTTTCGCTACTTAGTCGTAGCTCAACACCAA
Internal bar code:ATTTATCCTCCGTTTACTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:649
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCATATTTGCGTGCGCCATG
Suggested primer 2:CTTACCGTATACCGCGTGCT