Insertion junction: CLIP2.060670_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060670
Chromosome:chromosome 1
Location:5515242
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g039250 RPS2 Cytosolic 80S ribosomal protein S2; (1 of 1) K02981 - small subunit ribosomal protein S2e (RP-S2e, RPS2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGCGACCGGGGCGCAAGTATCGAGGCGAGTCCCATGGAGGCCGAATG
Internal bar code:ATTTATCCTCCGTTTACTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1098
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CTTACCGTATACCGCGTGCT
Suggested primer 2:TCATATTTGCGTGCGCCATG