Insertion junction: CLIP2.060681_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060681
Chromosome:chromosome 3
Location:5024626
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179860 (1 of 1) 2.1.1.203 - tRNA (cytosine(34)-C(5))-methyltransferase; tRNA-(m5C) methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGAGGTGTGCGTAAAGATTATCTAGCAATGCCGCTTGGACAGGGCAGC
Internal bar code:GCATCTATGCATGGCGCTGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1376
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCAACCAAAACGCTGCC
Suggested primer 2:CACGTCGGAACCACTACTCC