Insertion junction: CLIP2.060685_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060685
Chromosome:chromosome 17
Location:2633595
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716650 (1 of 77) IPR029071 - Ubiquitin-related domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCTCCTTGCAAGCGCCCCTGCGTGTGCTGCAACAGGCGCGCATGTTTT
Internal bar code:GGTATGCTTGACTTAATTTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:820
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTGTCCGTGGACTCCAAG
Suggested primer 2:AACCACAGATGTGTAGGCGG