Insertion junction: CLIP2.060686_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060686
Chromosome:chromosome 11
Location:3174859
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g475900 (1 of 2) PTHR12121//PTHR12121:SF34 - CARBON CATABOLITE REPRESSOR PROTEIN 4 // LD39302P 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGTAGGACTCAGAGCAGAGGAGGCTGCGGGAACGCGGCCAGCAGCAGT
Internal bar code:GTGGGCAAATTTTGGGAACTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3800
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTGCACGTCTGCTGCTAT
Suggested primer 2:ACTTCCATATCCGGGTCCCA