Insertion junction: CLIP2.060688_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060688
Chromosome:chromosome 3
Location:3911514
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170850 MMP19 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTAGACCCAGGATATCGTGACAGGGTGGCTTATAATTTCAAGGCTTT
Internal bar code:CCATTGGATGGCCCATGTAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2892
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CGACCTCTCTGTACCGCATC
Suggested primer 2:CTGGGTGGAGGAGAAGGAGA