Insertion junction: CLIP2.060688_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060688
Chromosome:chromosome 3
Location:3911515
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170850 MMP19 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGACCGGGGACGTGGTCCAGTCGCTCACACTCCATTCCGCCCACCCTC
Internal bar code:TATGATAGTTCCTGACTAGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1541
LEAP-Seq percent confirming:97.7273
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGTGGAGGAGAAGGAGA
Suggested primer 2:CGACCTCTCTGTACCGCATC